Job Description P0ABE2 Confidence 2.54% Date Thu Jan 5 11:15:17 GMT 2012 Rank 100 Aligned Residues 41 % Identity 15% Template c1xb4C_ PDB info PDB header:unknown function Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8 PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																		.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	R	F	T	G	E	R	F	L	N	R	.	.	.	H	R	M	I	Y	S	T	L	A	E	E	L	S	T	T	V	H	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	T	Y	T	I	K	E	W	E	G
Query Conservation														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.				.	.	.																.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																						.
Template Sequence		K	N	L	F	N	N	E	D	.	I	Q	R	S	V	S	Q	V	F	I	D	E	I	W	S	Q	M	T	K	E	G	.	K	C	L	P	I	D	Q	S	G	R	R	S	S	N	T	T	T	T	R	Y	F	I	L	W	K	S	L	D	S	W	A	S
Template Known Secondary structure			B	T	T			T	T	.	T	T																		T	T	.	S						S	S	S				S	T	T	T								S	S
Template Predicted Secondary structure										.																						.
Template SS confidence
		73	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions