Return to main results Retrieve Phyre Job Id

Job DescriptionP76406
Confidence1.63%DateThu Jan 5 12:22:44 GMT 2012
Rank65Aligned Residues23
% Identity30%Templated1r3ha2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20....... ..30.......
Predicted Secondary structure 









.

Query SS confidence 












.









Query Sequence  MSGCAVHNDETSI. GKFGLAYKSN
Query Conservation    



 

 
 
.
  

 
 
 
Alig confidence 












.









Template Conservation    



  

          


 
Template Sequence  LQDCDVEPDRHLCLWYNQLAYDSE
Template Known Secondary structure 
STT



SS
Template Predicted Secondary structure 







Template SS confidence 























   1098.1100.........1110.........1120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions