Job Description P76406 Confidence 1.96% Date Thu Jan 5 12:22:44 GMT 2012 Rank 46 Aligned Residues 89 % Identity 16% Template c1zs8C_ PDB info PDB header:immune system Chain: C: PDB Molecule:histocompatibility 2, m region locus 10.5; PDBTitle: crystal structure of the murine mhc class ib molecule m10.5 Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																									.	.	.	.
Query SS confidence													.																																																									.	.	.	.
Query Sequence		M	S	G	C	A	V	H	N	D	E	T	.	S	I	G	K	F	G	L	A	Y	K	S	N	I	Q	R	K	L	D	N	Q	Y	Y	T	E	A	E	A	S	L	A	R	G	R	I	S	G	A	E	N	I	V	K	N	D	A	T	H	F	C	V	T	Q	G	K	K	M	.	.	.	.	Q	I	V	E	L	K	T	E
Query Conservation													.																																																									.	.	.	.
Alig confidence													.																																																									.	.	.	.
Template Conservation
Template Sequence		V	F	G	C	N	V	A	H	D	G	S	F	L	G	G	H	Y	G	L	T	Y	Y	G	Y	D	Y	I	I	L	N	E	D	L	N	S	W	T	T	E	G	K	V	G	G	K	F	N	S	V	T	E	G	W	R	T	Y	L	K	G	E	C	T	E	R	F	L	R	C	L	D	L	G	K	E	T	L	L	R	S	D
Template Known Secondary structure									T	T	S												T	T	T							T	T	S	S						S					T														T																		S			B
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		90			.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		G	.	.	V	G	L	H	G	V	A	R	L	T	F	K	C
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		A	P	R	T	H	V	T	H	K	V	T	V	T	L	R	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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