Return to main results Retrieve Phyre Job Id

Job DescriptionP76406
Confidence2.04%DateThu Jan 5 12:22:44 GMT 2012
Rank44Aligned Residues23
% Identity17%Templatec1iaoB_
PDB info PDB header:mhc iiChain: B: PDB Molecule:mhc class ii i-ad; PDBTitle: class ii mhc i-ad in complex with ovalbumin peptide 323-339
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30. ......
Predicted Secondary structure 









.

Query SS confidence 
















.





Query Sequence  MSGCAVHNDETSIGKFG. LAYKSN
Query Conservation    



 

 
 

  
.
 
 
 
Alig confidence 
















.





Template Conservation    



             




Template Sequence  KGECYYTNGTQRIRLVTRYIYNRE
Template Known Secondary structure  TTTTTT
Template Predicted Secondary structure 





Template SS confidence 























   12.......20.........30.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions