Job Description P21369 Confidence 27.85% Date Thu Jan 5 11:38:14 GMT 2012 Rank 55 Aligned Residues 114 % Identity 12% Template c3g8rA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	A	N	R	L	I	D	W	C	Q	S	R	G	E	A	V	I	A	S	Q	D	W	H	P	A	N	H	G	S	F	A	S	Q	H	G	V	E	P	Y	T	P	G	Q	L	D	G	L	P	Q	T	F	W	P	D	H	C	V	Q	N	S	E	G	A	Q	L	H	P	L	L	H	Q	K	A	I	A	A	V	F	H
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		E	Q	X	Q	K	L	V	A	E	X	K	A	N	G	F	K	A	I	C	T	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	E	S	V	D	L	I	E	A	H	G	I	E	.	.	.	.	.	I	I
Template Known Secondary structure														T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T			.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																						100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	E	N	P	L	V	D	S	Y	S	A	F	F	D	N	G	R	R	Q	K	T	S	L	D	D	W	L	R	D	H	E	I	D	E	L	I	V	M	G	L	A	T	D	Y	C	V	K	F	T	V	L	D	A	L	Q	L	G	Y	K	V	N	V	I	T	D	G	C	R	G	V	N	I	Q	P	Q	D	S	A	H
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	C	S	F	T	D	W	P	L	L	E	R	I	A	R	S	D	K	P	V	V	A	S	T	A	G	A	R	R	E	D	I	D	K	V	V	S	F	X	L	H	R	G	K	D	.	L	T	I	X	H	C	V	A	E	Y	P	T	P	D	D	H	L	H	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	T	T										T	S		S							T	T															T	T	T			.										S	S			G	G	G			T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
		116													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
			191	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	F	M	E	M	S	A	A	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	R	I	K	T	L	R	Q	Q	Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions