 |
Job Description | P21369 | Confidence | 19.05% | Date | Thu Jan 5 11:38:14 GMT 2012 |
Rank | 99 | Aligned Residues | 67 |
% Identity | 18% | Template | c3g68A_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:putative phosphosugar isomerase; |
PDBTitle: crystal structure of a putative phosphosugar isomerase (cd3275) from2 clostridium difficile 630 at 1.80 a resolution
|
Resolution | 1.80 Å |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
. | . | 170 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | D | H | E | I | D | E | L | I | V | M | G | L | A | T | D | Y | C | V | K | F | T | V | L | D | A | L | Q | L | . |
. |
G | Y | K | V | N | V | I | T | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | R | G | V | N | I | Q | P | Q | D | S | A | H | A | F | M | E | M | S | A | A |
Query Conservation |   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   | . | . |
|   |   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|
|   |   |
Template Sequence |   |
V | K | R | T | N | L | K | K | I | I | I | T | G | S | G | T | S | Y | H | S | G | V | Q | V | Q | P | Y | L | Q | N | L | L | D | I | D | V | V | K | X | Y | P | F | X | I | T | E | D | T | F | K | F | D | N | E | N | T | L | V | V | G | V | S | Q | G | G | S | S | Y | S | T | Y | N | A | X | K | L | A | E | D | K |
Template Known Secondary structure |   |
G | G | G | S |
|
| S |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |
| G | G | G |
|
| G | G | G | G | S | S |
|
| T | T |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
  |   |
199 | 200 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
G | A | T | L | Y | T |
Query Conservation |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
Template Sequence |   |
G | C | K | I | A | S |
Template Known Secondary structure |   |
T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|