Job Description P21369 Confidence 20.12% Date Thu Jan 5 11:38:14 GMT 2012 Rank 90 Aligned Residues 66 % Identity 6% Template c2ha8A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein; PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1 Resolution 1.60 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	V	M	G	L	A	T	D	Y	C	V	K	F	T	V	L	D	A	L	Q	L	G	Y	K	V	N	V	I	T	D	G	C	R	G	V	N	I	Q	P	Q	D	S	A	H	A	F	M	E	M	S	A	A	G	A	T	L	Y	T	L	A	D	W	E	E	T	Q
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		I	V	V	A	S	L	I	D	K	P	T	N	L	G	G	L	C	R	T	C	E	V	F	G	A	S	V	L	V	V	G	S	L	Q	C	I	S	D	.	.	K	Q	F	Q	H	L	S	V	S	A	E	Q	W	L	P	L	V	E	V	K	P	P	Q	L	I	D	Y	L
Template Known Secondary structure						T	T																	T	T		S					S		G	G	G	G	G	S	.	.								T	T	G	G	G	T	S							G	G	G
Template Predicted Secondary structure																																								.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions