Return to main results Retrieve Phyre Job Id

Job DescriptionP77285
Confidence99.10%DateThu Jan 5 12:27:13 GMT 2012
Rank3Aligned Residues98
% Identity18%Templatec2kzxA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a3dht5 from clostridium thermocellum,2 northeast structural genomics consortium target cmr116
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140......... 150....
Predicted Secondary structure 

























...............




Query SS confidence 



























































. . . . . . . . . . . . . . .




Query Sequence  AVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKK. . . . . . . . . . . . . . . ISGAD
Query Conservation   

      

 
 
   
 

 

 
 

 

   





  
      
  

 

 ...............     
Alig confidence 




















.





































...............




Template Conservation 
 
     
  
    
 


.




  
        
            
             
    
   


 
 
Template Sequence  YYAEADDFDESGWKDTVTIEV. KNGKIVSVDWNAINKDGGDDKDTLSRNGGYKMVEYGGAQAEWHEQAEKVEAYLVEKQD
Template Known Secondary structure 
SS

TTS.TTTTT
S
T



S
SSS


S

TTT
Template Predicted Secondary structure 






.
































Template SS confidence 















































































   6...10.........20...... ...30.........40.........50.........60.........70.........80....
 
   155....160.........170.........180........
Predicted Secondary structure 















Query SS confidence 

































Query Sequence  DAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAG
Query Conservation         
    










 

  


 

Alig confidence 

































Template Conservation              

 







  
  

  

Template Sequence  PTDIKYKDNDGHTDAISGATIKVKKFFDLAQKAL
Template Known Secondary structure  SS




SSS


TTT
S

S
TT
Template Predicted Secondary structure 









Template SS confidence 

































   85....90.........100.........110........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions