Job Description P77285 Confidence 3.45% Date Thu Jan 5 12:27:13 GMT 2012 Rank 45 Aligned Residues 89 % Identity 21% Template c1keeH_ PDB info PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.								.	.	110	.						.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																			.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.					.	.	.	.	.				.
Query SS confidence											.	.	.																			.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.					.	.	.	.	.				.
Query Sequence		E	H	R	V	Y	I	A	K	Q	.	.	.	D	D	K	P	V	A	A	V	L	E	A	T	A	P	D	G	Y	S	.	.	.	.	.	.	.	.	.	G	A	I	Q	L	L	.	.	.	.	.	.	.	V	G	A	D	.	.	.	.	.	F	N	G	.	T	V	L	G	T	R	V	T	E	H	H	E	T	P	G
Query Conservation											.	.	.																			.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.					.	.	.	.	.				.
Alig confidence											.	.	.																			.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.					.	.	.	.	.				.
Template Conservation
Template Sequence		D	G	T	Q	F	H	G	R	A	I	G	A	T	G	S	A	V	G	E	V	V	F	N	T	S	M	T	G	Y	Q	E	I	L	T	D	P	S	Y	S	R	Q	I	V	T	L	T	Y	P	H	I	G	N	V	G	T	N	D	A	D	E	E	S	S	Q	V	H	A	Q	G	L	V	I	R	D	L	P	L	I	A	S
Template Known Secondary structure		T										S		S													S	S							T		G	G	G	B	T						S	S	S	B			T	T				G	G	G		S	S	S	S			B	S					S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	K	I	E	L	R	L	S	D	W	I	T	H	F	A	G	K	K	I	S	G	A	D	D	A	H	W	A	V	K	K	D	G	G	D	F	D	Q	F	T	G	A	T	I	T	P	R	A	V	V	N	A	V	K	R
Query Conservation
Alig confidence								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		N	F	R	N	T	E	.	D	L	S	S	Y	L	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	I	V	A	I	A	D	.	.	I	D	T	R	K	L	T	R	L	L	R	E
Template Known Secondary structure			T	T		S	S	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						S	.	.	S
Template Predicted Secondary structure								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		91	.	.	.	.	.		.	.	.	100	.	.	.	.																					.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions