Return to main results Retrieve Phyre Job Id

Job DescriptionP00579
Confidence26.70%DateThu Jan 5 10:56:46 GMT 2012
Rank447Aligned Residues60
% Identity15%Templated2fxaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   535....540.........550 .........560.........570.........580.........590.......
Predicted Secondary structure 
..













Query SS confidence 















. .














































Query Sequence  ATTESLRAATHDVLAG. . LTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRK
Query Conservation           
      ..
   
  
                

         

 
    
  
Alig confidence 















..













...





























Template Conservation   
 
 
       
    

  
  

  
  ...    
  


  
 
  



  
  

  
Template Sequence  ALWKSIEKDWQQWLKPYDLNINEHHILWIAYQ. . . LNGASISEIAKFGVXHVSTAFNFSKKLEER
Template Known Secondary structure  TGGGT

...TSTT

Template Predicted Secondary structure 



...








Template SS confidence 
































































   26...30.........40.........50....... ..60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions