Job Description P00579 Confidence 76.64% Date Thu Jan 5 10:56:46 GMT 2012 Rank 154 Aligned Residues 54 % Identity 24% Template d2b0la1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CodY HTH domain Resolution 2.90

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		R	A	A	T	H	D	V	L	A	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	.	.	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A	K	A	L	R	K	L
Query Conservation																																.	.
Alig confidence																																.	.																		.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		K	A	V	V	Q	M	A	I	S	S	L	S	Y	S	E	L	E	A	I	E	H	I	F	E	E	L	D	G	N	E	G	L	L	V	A	S	K	I	A	D	R	V	G	I	T	R	S	V	I	.	.	.	.	V	N	A	L	R	K	L
Template Known Secondary structure											T	S												T	T	S	S	B	T	T														T							.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions