Return to main results Retrieve Phyre Job Id

Job DescriptionP00579
Confidence56.14%DateThu Jan 5 10:56:46 GMT 2012
Rank288Aligned Residues31
% Identity10%Templated1xd7a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   556...560.........570.........580.........590
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  AKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQI
Query Conservation    
                

         

 
 
Alig confidence 







....






















Template Conservation    
  

 ....    

  


   
    
 

Template Sequence  HILSLISM. . . . DEKTSSEIIADSVNTNPVVVRRM
Template Known Secondary structure  T....
S


TS
Template Predicted Secondary structure 
....







Template SS confidence 


































   13......20 .........30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions