Return to main results Retrieve Phyre Job Id

Job DescriptionP00579
Confidence37.31%DateThu Jan 5 10:56:46 GMT 2012
Rank381Aligned Residues39
% Identity18%Templated1vola2
SCOP infoCyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   557..560.........570.........580.........590.........
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  KVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLR
Query Conservation   
                

         

 
    
  

 
Alig confidence 






....































Template Conservation 
 
 
  ....    
  


    

  

   

 
     
Template Sequence  YMASQAS. . . . AEKRTQKEIGDIAGVADVTIRQSYRLIYPRAP
Template Known Secondary structure  TS....SS


T

GGG
Template Predicted Secondary structure 
....







Template SS confidence 










































   259260..... ....270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions