 |
Job Description | P00579 | Confidence | 37.31% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 381 | Aligned Residues | 39 |
% Identity | 18% | Template | d1vola2 |
SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
|
Resolution | 2.70 |
|
  |   |
557 | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | R | M | R | F | G | I | D | M | N | T | D | Y | T | L | E | E | V | G | K | Q | F | D | V | T | R | E | R | I | R | Q | I | E | A | K | A | L | R | K | L | R |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   | . | . | . | . |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
Y | M | A | S | Q | A | S | . |
. |
. |
. |
A | E | K | R | T | Q | K | E | I | G | D | I | A | G | V | A | D | V | T | I | R | Q | S | Y | R | L | I | Y | P | R | A | P |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | . | . | . | . | S | S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | |
|
|
|
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|