 |
Job Description | P00579 | Confidence | 23.42% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 474 | Aligned Residues | 44 |
% Identity | 11% | Template | d1t6sa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ScpB/YpuH-like
|
Resolution | 1.95 |
|
  |   |
456 | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | |
|
. | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | E | T | I | N | K | L | N | R | I | S | R | Q | M | L | Q | E | M | G | R | E | P | T | P | E | E | L | A | E | R | M | . |
. |
L | M | P | E | D | K | I | R | K | V | L | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
M | Q | E | Q | R | Q | Q | L | L | R | S | L | E | A | L | I | F | S | S | E | E | P | V | N | L | Q | T | L | S | Q | I | T | A | H | K | F | T | P | S | E | L | Q | E | A | V | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| B |
|  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|