 |
Job Description | P00579 | Confidence | 40.89% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 363 | Aligned Residues | 56 |
% Identity | 25% | Template | d1ppjf_ |
SCOP info | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
|
Resolution | 2.10 |
|
 |
  |   |
391 | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | K | Y | T | N | R | G | L | Q | F | L | D | L | I | Q | E | G | N | I | G | L | M | K | A | V | D | K | F | E | Y | R | R | G | Y | K | F | S | T | Y | A | T | W | W | I | R | Q | A | I | T | R | S | I | A | D | Q | A | R | T | I | R | I | P | V | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|   |   |
|
|
|
|   |
| . |   |   |   |
|   |
|
|
|
|
|
|
| . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   | . | . | . | . |
|
|
|
|
Template Sequence |   |
A | A | G | F | N | K | L | G | L | M | R | D | D | T | I | H | E | . |
N | D | D | V | K | E | A | I | R | R | L | P | . |
. |
. |
. |
E | N | L | Y | D | D | R | V | F | R | I | K | R | A | L | D | L | S | M | R | Q | Q | I | . |
. |
. |
. |
L | P | K | E |
Template Known Secondary structure |   |
 |  |
| G | G | G | G | T |
|
| G | G | G | G |
|
|
| . |
|  |  |  |  |  |  |  |  | T | S |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |
|
| G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
. | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|