Return to main results Retrieve Phyre Job Id

Job DescriptionP00579
Confidence28.05%DateThu Jan 5 10:56:46 GMT 2012
Rank433Aligned Residues39
% Identity15%Templated1octc1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   550.........560.........570.. .......580........
Predicted Secondary structure 











.


Query SS confidence 






















.















Query Sequence  GLTAREAKVLRMRFGIDMNTDYT. LEEVGKQFDVTRERIR
Query Conservation   
   
  
              .  

         

 
Alig confidence 






















.















Template Conservation    
  
   

  
     
       

  
 
   

 
Template Sequence  SIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIR
Template Known Secondary structure 



SS

T
S
Template Predicted Secondary structure 










Template SS confidence 







































   107..110.........120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions