Job Description P00579 Confidence 99.97% Date Thu Jan 5 10:56:46 GMT 2012 Rank 7 Aligned Residues 101 % Identity 60% Template d1ku2a2 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.90

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	T	G	L	T	I	E	Q	V	K	D	I	N	R	R	M	S	I	G	E	A	K	A	R	R	A	K	K	E	M	V	E	A	N	L	R	L	V	I	S	I	A	K	K	Y	T	N	R	G	L	Q	F	L	D	L	I	Q	E	G	N	I	G	L	M	K	A	V	D	K	F	E	Y	R	R	G	Y	K	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V	D	G	K	L	K	S	L	P	K	E	L	K	R	Y	L	H	I	A	R	E	G	E	A	A	R	Q	H	L	I	E	A	N	L	R	L	V	V	S	I	A	K	K	Y	T	G	R	G	L	S	F	L	D	L	I	Q	E	G	N	Q	G	L	I	R	A	V	E	K	F	E	Y	K	R	R	F	K	F	S
Template Known Secondary structure										S																									T	T										T	T		S	S	S	S																						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	A	T	W	W	I	R	Q	A	I	T	R	S	I	A	D	Q	A	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	A	T	W	W	I	R	Q	A	I	N	R	A	I	A	D	Q	A	R	T
Template Known Secondary structure																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions