 |
Job Description | P00579 | Confidence | 47.16% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 326 | Aligned Residues | 42 |
% Identity | 19% | Template | d1dpua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| C-terminal domain of RPA32
|
Resolution | UNK |
|
  |   |
549 | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | |
. | . | . | . | . | . | . | . | . | 590 |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | L | T | A | R | E | A | K | V | L | R | M | R | F | G | I | D | M | N | T | D | Y | T | L | E | E | V | G | K | Q | F | . |
D | V | T | R | E | R | I | R | Q | I |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   | . |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
N | G | L | T | V | A | Q | N | Q | V | L | N | L | I | K | A | C | P | R | P | E | G | L | N | F | Q | D | L | K | N | Q | L | K | H | M | S | V | S | S | I | K | Q | A |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|