Job Description P00579 Confidence 48.84% Date Thu Jan 5 10:56:46 GMT 2012 Rank 317 Aligned Residues 246 % Identity 9% Template c3qweA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:gem-interacting protein; PDBTitle: crystal structure of the n-terminal domain of the gem interacting2 protein Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	T	H	V	G	S	E	L	S	Q	E	D	L	D	D	D	E	D	E	D	E	E	D	G	D	D	D	S	A	D	D	D	N	S	I	D	P	E	L	A	R	E	K	F	A	E	L	R	A	Q	Y	V	V	T	R	D	T	I	K	A	K	G	R	S	H	A	T	A	Q	E	E	I	L	K	L	S	E	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	D	L	R	L	I	R	T	K	G	G	V	D	A	A	L	E	Y	A	K	T	W	S	R	Y	A	K	E	L	L	A	W	T	E	K	R	A	S	Y	E	L	E	F	A	K	S	T	M	K	I	A	E	A	G	K	V	S	I	Q	Q	Q	S	H	M	P	L	Q	Y	I	Y	T	L	F	L	E	H	D	L
Template Known Secondary structure											S	T	T																																																	T	T			S		T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		K	Q	F	R	L	V	P	K	Q	F	D	Y	L	V	N	S	M	R	V	M	M	D	R	V	R	T	Q	E	R	L	I	M	K	L	C	V	E	Q	C	K	M	P	K	K	N	F	I	T	L	F	T	G	N	E	T	S	D	T	W	F	N	A	A	I	A	M	N	K	P	W	S	E	.	.	.	K	L	H	D	V
Query Conservation																																																																										.	.	.
Alig confidence																																																																										.	.	.
Template Conservation
Template Sequence		S	L	G	T	L	A	M	E	T	V	A	Q	Q	K	R	D	Y	Y	Q	P	L	A	A	K	R	T	E	I	E	K	W	R	K	E	F	K	E	Q	W	M	K	E	Q	K	R	M	N	E	A	V	Q	A	L	R	R	A	Q	L	Q	Y	V	Q	R	S	E	D	L	R	A	R	S	Q	G	S	K	Q	Q	E	R	R
Template Known Secondary structure																		T																																																					T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	E	V	H	R	A	L	Q	K	L	Q	Q	I	E	E	E	T	G	L	T	I	E	Q	V	K	D	I	N	R	R	M	S	I	G	E	A	K	A	R	R	A	K	K	E	M	V	E	A	N	L	R	L	V	I	S	I	A	K	K	Y	T	N	R	G	L	Q	F	L	D	L	I	Q	E	G	N	I	G	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	S	R	E	E	A	Q	A	K	A	Q	E	A	E	A	L	Y	Q	A	C	V	R	E	A	N	A	R	Q	Q	D	L	E	I	A	K	Q	R	I	V	S	H	V	R	K	L	V	F	Q	G	D	E	V	L	R	R	V	T	L	S	L	F	G	L	R	G	A	Q	A	E	R	G	P	R	A	F	A	A	L	A
Template Known Secondary structure																																																																							T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		414	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	D	K	F	E	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	C	A	P	F	E	P	G
Template Known Secondary structure				T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions