 |
Job Description | P00579 | Confidence | 36.21% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 386 | Aligned Residues | 49 |
% Identity | 20% | Template | c3oaaC_ |
PDB info |
PDB header:hydrolase/transport protein | Chain: C: PDB Molecule:atp synthase subunit alpha; |
PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon
|
Resolution | 3.26 Å |
|
  |   |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | T | W | W | I | R | Q | A | I | T | R | S | I | A | D | Q | A | R | T | I | R | I | P | V | H | M | I | E | T | I | N | K | L | N | R | I | S | R | Q | M | L | Q | E | M | G | R | E | P | T | P | E |
Query Conservation |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |
|
|
|
| . | . | . |   |
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
Y | L | A | P | Y | A | G | C | A | M | G | E | Y | F | R | D | R | G | E | D | A | L | I | I | . |
. |
. |
Y | D | D | L | S | K | Q | A | V | A | Y | R | Q | I | S | L | L | L | R | R | P | P | G | R | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . | . | . |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|