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Job DescriptionP00579
Confidence41.46%DateThu Jan 5 10:56:46 GMT 2012
Rank361Aligned Residues256
% Identity10%Templatec3m3wA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:protein kinase c and casein kinase ii substrate protein 3; PDBTitle: crystal strcuture of mouse pacsin3 bar domain mutant
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  ELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVP
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Template Sequence  RRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELHLEVREKL
Template Known Secondary structure  SS

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   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   264 .....270.........280.........290.........300.........310.........320........ .330.....
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Query Sequence  K. QFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSE. . . . . . . KLHDVSE
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Template Sequence  HGPDSERVRTWQRGAFHGFRASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTARKDEKTAQTRESHAKADSSMQLRKLQE
Template Known Secondary structure  TT


TTS

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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   336...340.........350.........360.........370.........380.........390...... ...400.........410....
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Query Sequence  EVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTN. RGLQFLDLIQEGNIGLMK
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Template Sequence  RVGRCTKEAEKMKTQYEQTLAELNRYTPRYMEDMEQAFESCQAAERQRLLFFKDVLLTLHQHLDLSSSDKFHELHRDLQQ
Template Known Secondary structure  TTT
GGG
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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   415....420.........430.........440.........450...
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Query Sequence  AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIP
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Template Sequence  SIEAASDEED. . . . . . . . . . . . . . LRWWRSTHGPGMAMN
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   271........280 .........290.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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