Job Description P00579 Confidence 35.33% Date Thu Jan 5 10:56:46 GMT 2012 Rank 392 Aligned Residues 260 % Identity 9% Template c3lllA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:protein kinase c and casein kinase substrate in neurons PDBTitle: crystal structure of mouse pacsin2 f-bar domain Resolution 3.30 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	V	G	S	E	L	S	Q	E	D	L	D	D	D	E	D	E	D	E	E	D	G	D	D	D	S	A	D	D	D	N	S	I	D	P	E	L	A	R	E	K	F	A	E	L	R	A	Q	Y	V	V	T	R	D	T	I	K	A	K	G	R	S	H	A	T	A	Q	E	E	I	L	K	L	S	E	V	F	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	G	D	L	M	N	C	L	H	E	R	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	L	V	E	K	G	P	Q	Y	G	T	V	E	K	A	W	I	A	V	M	S	E	A	E	R	V	S	E	L	H	L	E	V	K	A	S
Template Known Secondary structure		T																																																T	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.														.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	L	V	P	K	Q	F	D	Y	L	V	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	V	M	M	D	R	V	R	T	Q	E	R	L	I	M	K	L	C	V	E	Q	C	K	M	P	K	K	N	F	I	T	L	F	T	G	N	E	T	S	D	T	W	F	N	A	A	I	A	M	N	K	P
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																		.
Template Sequence		L	M	N	E	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	M	M	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	L	K	E	.	V	E	A	A	K	K	A	H	H	T	A	C	K	E	E	K	L	A	I	S	R	E	A	N	S	K	A	D	P	S	L
Template Known Secondary structure					T											T	T			B		S	S	S	S	B	T	T																						.																								T		S	S				S
Template Predicted Secondary structure																																																		.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		W	S	E	K	L	H	D	V	S	E	E	V	H	R	A	L	Q	K	L	Q	Q	I	E	E	E	T	G	L	T	I	E	Q	V	K	D	I	N	R	R	M	S	I	G	E	A	K	A	R	R	A	K	K	E	M	V	E	A	N	L	R	L	V	I	S	I	A	K	K	Y	T	N	.	R	G	L	Q	F	L	D	L
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		N	P	E	Q	L	K	K	L	Q	D	K	I	E	K	C	K	Q	D	V	L	K	T	K	D	K	Y	E	K	S	L	K	E	L	D	Q	T	T	P	Q	Y	M	E	N	M	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	R	F	F	R	E	V	L	L	E	V	Q	K	H	L	D	L	S	N	V	A	S
Template Known Secondary structure												G	G	G	T	T	T					T														T	T	S																																							T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	E	G	N	I	G	L	M	K	A	V	D	K	F	E	Y	R	R	G	Y	K	F	S	T	Y	A	T	W	W	I	R	Q	A	I	T	R	S	I	A	D	Q	A	R	T	I	R	I	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	T	I	Y	R	E	L	E	Q	S	I	K	A	A	D	A	V	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	W	F	R	A	N	H	G	P	G	M	A	M	N
Template Known Secondary structure															T							.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	S	T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.															.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions