Job Description P00579 Confidence 46.76% Date Thu Jan 5 10:56:46 GMT 2012 Rank 329 Aligned Residues 54 % Identity 13% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	D	S	A	T	T	E	S	L	R	A	A	T	H	D	V	L	A	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q
Query Conservation
Alig confidence																							.	.												.	.	.	.
Template Conservation																							.	.												.	.	.	.
Template Sequence		N	L	K	D	X	E	Q	N	S	A	K	A	V	V	L	L	K	A	X	A	N	.	.	E	R	R	L	Q	I	L	C	X	L	H	.	.	.	.	N	Q	E	L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q
Template Known Secondary structure																						S	.	.										T	T	.	.	.	.	T	S												T
Template Predicted Secondary structure																							.	.												.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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