Job Description P00579 Confidence 62.19% Date Thu Jan 5 10:56:46 GMT 2012 Rank 240 Aligned Residues 57 % Identity 14% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

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		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.			550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		L	P	L	D	S	A	T	T	E	S	L	R	A	A	T	H	D	V	L	A	.	.	G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q	I	E	A
Query Conservation																						.	.
Alig confidence																						.	.																.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		N	K	E	E	S	D	A	F	M	A	Q	V	K	A	F	R	A	S	V	N	A	E	T	V	A	P	E	F	I	V	K	V	R	K	K	L	S	.	.	.	.	.	.	L	T	Q	K	E	A	S	E	I	F	G	G	G	V	N	A	F	S	R	Y	E	K
Template Known Secondary structure																							T	S													T	T	.	.	.	.	.	.												S		T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions