Job Description P00579 Confidence 23.79% Date Thu Jan 5 10:56:46 GMT 2012 Rank 470 Aligned Residues 39 % Identity 10% Template c2vi6F_ PDB info PDB header:transcription Chain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain Resolution 2.6 Å

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		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	.	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		V	F	S	Q	A	Q	L	C	A	L	K	D	R	F	Q	K	Q	K	Y	L	S	L	Q	Q	M	Q	E	L	S	S	I	L	N	L	S	Y	K	Q	V	K
Template Known Secondary structure																			S															T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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