Job Description P00579 Confidence 50.12% Date Thu Jan 5 10:56:46 GMT 2012 Rank 311 Aligned Residues 291 % Identity 7% Template c2p03A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:alpha-2-macroglobulin receptor-associated PDBTitle: the structure of receptor-associated protein(rap) Resolution UNK

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	E	V	N	D	H	L	P	E	D	I	V	D	S	D	Q	I	E	D	I	I	Q	M	I	N	D	M	G	I	Q	V	M	E	E	A	P	D	A	D	D	L	M	L	A	E	N	T	A	D	E	D	A	A	E	A	A	A	Q	V	L	S	S	V	E	S	E	I	G	R	T	T	D	P	V	R	M	Y	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	Q	L	W	E	K	A	Q	R	L	H	L	P	P	V	R	L	A	E	L	H	A	D	L	K	I	Q	E	R	D	E	L	A	W	K	K	L	K	L	D	G	L	D	E	D	G	E	K	E	A	R	L	I	R	N	L	N	V	I	L	A	K	Y	G	L	D	G	K	K	D	A	R	Q	V	T	S	N	S	L
Template Known Secondary structure																																											T				S	S																		T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	T	V	E	L	L	T	R	E	G	E	I	D	I	A	K	R	I	E	D	G	I	N	Q	V	Q	C	S	V	A	E	Y	P	E	A	I	T	Y	L	L	E	Q	Y	D	R	V	E	A	E	E	A	R	L	S	D	L	I	T	G	F	V	D	P	N	A	E	E	D	L	A	P	T	A	T	H	V	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	T	Q	E	D	G	L	D	D	P	R	L	E	K	L	W	H	K	A	K	T	S	G	K	F	S	G	E	E	L	D	K	L	W	R	E	F	L	H	H	K	E	K	V	H	E	Y	N	V	L	L	E	T	L	S	R	T	E	E	I	H	E	N	V	I	S	P	S	D	L	S	D	I	K	G	S	V	L	H
Template Known Secondary structure								S	S		S														S				S																														T	T	S			S	S				S		T	T	T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	Q	E	D	L	D	D	D	E	D	E	D	E	E	D	G	D	D	D	S	A	D	D	D	N	S	I	D	P	E	L	A	R	E	K	F	A	E	L	R	A	Q	Y	V	V	T	R	D	T	I	K	A	K	G	R	S	H	A	T	A	Q	E	E	I	L	K	L	S	E	V	F	K	Q	F	R	L	V	P
Query Conservation
Alig confidence																																																															.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		S	R	H	T	E	L	K	E	K	L	R	S	I	N	Q	G	L	D	R	L	R	R	V	S	H	Q	G	Y	S	T	E	A	E	F	E	E	P	R	V	I	D	L	W	D	L	A	Q	S	A	N	L	T	D	K	E	L	E	A	F	R	E	.	.	.	.	.	.	E	L	K	H	F	E	A	K	I	E	K	H	N
Template Known Secondary structure																											T			S					S	S	T	T	T									T	T	T	T												.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	F	D	Y	L	V	N	S	M	R	V	M	M	D	R	V	R	T	Q	E	R	L	I	M	K	L	C	V	E	Q	C	K	M	P	K	K	N	F	I	T	L	F	T	G	N	E	T	S	D	T	W	F	N	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	Q	K	Q	L	E	I	A	H	E	K	L	R	H	A	E	S	V	G	D	G	E	R	V	S	R	S	R	E	K	H	A	L	L	E	G	R	T	K	E	L	G	Y	T	V	K	K	H	L	Q	D	L	S	G	R	I
Template Known Secondary structure																		G	G	G	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions