Return to main results Retrieve Phyre Job Id

Job DescriptionP00579
Confidence81.00%DateThu Jan 5 10:56:46 GMT 2012
Rank122Aligned Residues33
% Identity12%Templatec2kpjA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:sos-response transcriptional repressor, lexa; PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   556...560.........570.........580.........590..
Predicted Secondary structure 











Query SS confidence 




































Query Sequence  AKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEA
Query Conservation    
                

         

 
   
Alig confidence 







....
























Template Conservation    
  

 ....    

  

   


  


  
 
Template Sequence  ENLNSYIA. . . . KSEKTQLEIAKSIGVSPQTFNTWCK
Template Known Secondary structure  T....TSSS
T

T
Template Predicted Secondary structure  ....



Template SS confidence 




































   12....... 20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions