Job Description P00579 Confidence 97.04% Date Thu Jan 5 10:56:46 GMT 2012 Rank 37 Aligned Residues 256 % Identity 7% Template c1yvlB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 Resolution 3.00 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		I	N	Q	V	Q	C	S	V	A	E	Y	P	E	A	I	T	Y	L	L	E	Q	Y	D	R	V	E	A	E	E	A	R	L	S	D	L	I	T	G	F	V	D	.	P	N	A	E	E	D	L	A	P	T	A	T	H	V	G	S	E	L	S	Q	E	D	L	D	D	D	E	D	E	D	E	E	D	G	D	D	D	S
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		K	Q	D	W	E	H	A	A	N	D	V	S	F	A	T	I	R	F	H	D	L	L	S	Q	L	D	D	Q	Y	S	R	F	S	L	E	N	N	F	L	L	Q	H	N	I	R	K	S	K	R	N	L	Q	D	N	F	Q	E	D	P	I	Q	M	S	M	I	I	Y	S	C	L	K	E	E	R	K	I	L	E	N	A
Template Known Secondary structure			S						T	T																											T																				T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	D	N	S	I	D	P	E	L	A	R	E	K	F	A	E	L	R	A	Q	Y	V	V	T	R	D	T	I	K	A	K	G	R	S	H	A	T	A	Q	E	E	I	L	K	L	S	E	V	F	K	Q	F	R	L	V	P	K	Q	F	D	Y	L	V	N	S	M	R	V	M	M	D	R	V	R	T	Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	F	N	M	L	D	K	Q	K	E	L	D	S	K	V	R	N	V	K	D	K	V	M	C	I	E	H	E	I	K	S	L	E	D	L	Q	D	E	Y	D	F	K	C	K	T	L	Q	N	R	E	H	D	Q	K	Q	E	Q	L	L	L	K	K	M	Y	L	M	L	D	N	K	R	K	E	V	V	H	K	I	I
Template Known Secondary structure																																																	T	T					T	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	M	K	L	C	V	E	Q	C	K	M	P	K	K	N	F	I	T	L	F	T	G	N	E	T	S	D	T	W	F	N	A	A	I	A	M	N	K	P	W	S	E	K	L	H	D	V	S	E	E	V	H	R	A	L	Q	K	L	Q	Q	I	E	E	E	T	G	L	T	I	E	Q	V	K	D	I	N	R	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	N	V	T	E	L	T	Q	N	A	L	I	N	D	E	L	V	E	W	K	R	R	Q	Q	S	A	C	I	G	G	P	P	N	A	C	L	D	Q	L	Q	N	W	F	T	I	V	A	E	S	L	Q	Q	V	R	Q	Q	L	K	K	L	E	E	L	E	Q	K	Y	T	Y	E	H	D	P	I	T	K	N	K
Template Known Secondary structure																	T															T		S					S																																		T	T
Template Predicted Secondary structure
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	E	A	K	A	R	R	A	K	K	E	M	V	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	L	W	D	R	T	F	S	L	F	Q	Q	L	I	Q	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1299	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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