Job Description P00579 Confidence 29.61% Date Thu Jan 5 10:56:46 GMT 2012 Rank 422 Aligned Residues 39 % Identity 18% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	L	T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	.	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		S	I	E	T	N	I	R	V	A	L	E	K	S	F	L	E	N	Q	K	P	T	S	E	E	I	T	M	I	A	D	Q	L	N	M	E	K	E	V	I	R
Template Known Secondary structure																			S	S														T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions