Job Description P00579 Confidence 64.59% Date Thu Jan 5 10:56:46 GMT 2012 Rank 224 Aligned Residues 293 % Identity 8% Template c1f5nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. Resolution 1.70 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	I	N	D	M	G	I	Q	V	M	E	E	A	P	D	A	D	D	L	M	L	A	E	N	T	A	D	E	D	A	A	E	A	A	A	Q	V	L	S	S	V	E	S	E	I	G	R	T	T	D	P	V	R	M	Y	M	R	E	M	G	T	V	E	L	L	T	R	E	G	E	I	D	I	A	K	R	I	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	L	E	S	L	V	L	T	Y	V	N	A	I	S	S	G	D	L	P	C	M	E	N	A	V	L	A	L	A	Q	I	E	N	S	A	A	V	Q	K	A	I	A	H	Y	E	Q	Q	M	G	Q	K	V	Q	L	P	T	E	S	L	Q	E	L	L	D	L	H	R	D	S	E	R	E	A	I	E	V	F	I	R
Template Known Secondary structure																		T	S			B																																		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	Q	V	Q	C	S	V	A	E	Y	P	E	A	I	T	Y	L	L	E	Q	Y	D	R	V	E	A	E	E	A	R	L	S	D	L	I	T	G	F	V	D	P	N	A	E	E	D	L	A	P	T	A	T	H	V	G	S	E	L	S	Q	E	D	L	D	D	D	E	D	E	D	E	E	D	G	D	D	D	S
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	S	F	K	D	V	D	H	L	F	Q	K	E	L	A	A	Q	L	E	K	K	R	D	D	F	C	K	Q	N	Q	E	A	S	S	D	R	C	S	G	L	L	Q	V	I	F	S	P	L	E	E	E	V	K	A	G	I	Y	S	K	P	G	G	Y	R	L	F	V	Q	K	L	Q	D	L	K	K
Template Known Secondary structure		.	.	.	.	.						G	G	G																																														T	T	T	T	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	D	N	S	I	D	P	E	L	A	R	E	K	F	A	E	L	R	A	Q	Y	V	V	T	R	D	T	I	K	A	K	G	R	S	H	A	T	A	Q	E	E	I	L	K	L	S	E	V	F	K	Q	F	R	L	V	P	K	Q	F	D	Y	L	V	N	S	M	R	V	M	M	D	R	V	R	T	Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	Y	E	E	P	R	K	G	I	Q	A	E	E	I	L	Q	T	Y	L	K	S	K	E	S	M	T	D	A	I	L	Q	T	D	Q	T	L	T	E	K	E	K	E	I	E	V	E	R	V	K	A	E	S	A	Q	A	S	A	K	M	L	H	E	M	Q	R	K	N	E	Q	M	M	E	Q	K	E	R	S	Y	Q
Template Known Secondary structure						S	S				T	T												T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	M	K	L	C	V	E	Q	C	K	M	P	K	K	N	F	I	T	L	F	T	G	N	E	T	S	D	T	W	F	N	A	A	I	A	M	N	K	P	W	S	E	K	L	H	D	V	S	E	E	V	H	R	A	L	Q	K	L
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		E	H	L	K	Q	L	T	E	K	M	E	N	D	R	V	Q	L	L	K	E	Q	E	R	T	L	A	L	K	L	Q	.	E	Q	E	Q	L	L	K	E	G	F	Q	K	E	S	R	I	M	K	N	E	I	Q	D	L	Q	T	K	M
Template Known Secondary structure																																.									T
Template Predicted Secondary structure																																.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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