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Job DescriptionP00579
Confidence98.00%DateThu Jan 5 10:56:46 GMT 2012
Rank29Aligned Residues280
% Identity8%Templatec1c1gA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
Resolution7.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  DPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLA
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Template Sequence  DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDA
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  PTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEV
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Template Sequence  EADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRK
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  FKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSE
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Template Sequence  YEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKT. . . . VTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAET
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   162.......170.........180.........190......... 200.........210.........220.........230.......
 
   336...340.........350.........360.........370.........
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Query Sequence  EVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEM
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Template Sequence  RAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM
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   238.240.........250.........260.........270.........280.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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