Return to main results Retrieve Phyre Job Id

Job DescriptionP76210
Confidence4.89%DateThu Jan 5 12:20:35 GMT 2012
Rank49Aligned Residues40
% Identity18%Templatec1yj5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30..... ....40......
Predicted Secondary structure 





....




Query SS confidence 




























. . . .










Query Sequence  IQSNYGDLNIKSLAFDSFKERLQSTMTAL. . . . TFFISTGQCDC
Query Conservation 




























....










Alig confidence 




























....










Template Conservation 




 

  
         

  
   
 

     
      
Template Sequence  IFTNQXGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLN
Template Known Secondary structure 
TTSS
TS


SSSSS
Template Predicted Secondary structure 





















Template SS confidence 











































   214.....220.........230.........240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions