 |
Job Description | P77454 | Confidence | 86.14% | Date | Thu Jan 5 12:29:25 GMT 2012 |
Rank | 71 | Aligned Residues | 61 |
% Identity | 25% | Template | d2hdsa1 |
SCOP info | beta-lactamase/transpeptidase-like
| beta-lactamase/transpeptidase-like
| beta-Lactamase/D-ala carboxypeptidase
|
Resolution | 1.16 |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | K | L | Q | Q | A | V | D | Q | A | Y | T | Q | F | H | S | L | N | G | G | Q | N | A | D | Y | I | P | F | L | A | N | V | P | G | Q | L | A | A | V | A | I | V | T | C | D | G | N | V | Y | S | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | S | D | Y | R | F | A | L | E | S | I | S | K | V | C | T |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |
|   |   | . |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|
|
|
|   |   |
|
Template Sequence |   |
Q | Q | I | N | D | I | V | H | R | T | I | T | P | L | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | Q | K | I | P | G | M | A | V | A | V | I | Y | . |
Q | G | K | P | Y | Y | F | T | W | G | Y | A | D | I | A | K | K | Q | P | V | T | Q | Q | T | L | F | E | L | G | S | V | S | K | T | F | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | T |
| S |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |
|
| T | T |
| B |  |  |
| G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
  |   |
73 | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | L | A | L | E | D | V |
Query Conservation |   |
  |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|
Template Sequence |   |
G | V | L | G | G | D | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|