Return to main results Retrieve Phyre Job Id

Job DescriptionP77454
Confidence100.00%DateThu Jan 5 12:29:25 GMT 2012
Rank7Aligned Residues282
% Identity34%Templated1mkia_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Glutaminase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30..... ....40.........50.........60.........70.........80.........90.........100..
Predicted Secondary structure 





...
























Query SS confidence 









. . .


































































Query Sequence  NADYIPFLAN. . . VPGQLAAVAIVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
Query Conservation 

 


 

 ...


   



 
 

     

    









   


   
   
   

 



  



 
Alig confidence 









...





























.



































Template Conservation 
         
  


   



 



     

    



.


 
   


   
   
   

 



  



 
Template Sequence  VEYYRPFAANGQSANDSQLGICVLEPDGTXIHAGDWNVSFTXQ. ISKVISFIAACXSRGIPYVLDRVDVEPTGDAFNSII
Template Known Secondary structure  GGGGGG
B


TT


TTS
STT



.

TT





SS
TT

Template Predicted Secondary structure 



















.









Template SS confidence 















































































   22.......30.........40.........50.........60.... .....70.........80.........90.........100
 
   103.. ....110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 


.


























Query SS confidence 


.











































































Query Sequence  ALE. LHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGYL
Query Conservation   

.   
 
 








   


 
     
   

      

  
  
  
  

  
  

 



 

  
 
Alig confidence 


.











































































Template Conservation   


   
 
 








   


 
     
   
       

  
  
  
  

  
  

 



 

  
 
Template Sequence  RLEINKPGKPFNPXINAGALTIASILPGESAYEKLEFLYSVXETLIGKRPRIHEEVFRSEWETAHRNRALAYYLKETNFL
Template Known Secondary structure  STT


S
SSSSSSSSSS


B

TT

Template Predicted Secondary structure 

































Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  YCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSG
Query Conservation    
    

 

  


 

  


  





 

 
 


 

     
 


 
 





 

 

  







Alig confidence 















































































Template Conservation    
    

 

  


 

  


  





 

 
 


 


    
 


 
 





 

 

  







Template Sequence  EAEVEETLEVYLKQCAXESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALXLTCGXYNASGKYAAFVGVPAKSG
Template Known Secondary structure  SS
TB
TTTTTTT
S
TTGGGT
S

Template Predicted Secondary structure 

































Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   262.......270... ......280.........290.........300........
Predicted Secondary structure 



..........











Query SS confidence 











. . . . . . . . . .


































Query Sequence  VGGGILAVVPGV. . . . . . . . . . MGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVF
Query Conservation 
 








 .......... 



 

 

  





   

 

    

 
Alig confidence 











..........


































Template Conservation 
 








 
          



 

 

  





   

 

    



Template Sequence  VSGGIXALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGXLLKHXAQEWELSIF
Template Known Secondary structure  TTS
TTTT
SSTTTT

S
B
TTSSBT



Template Predicted Secondary structure 




























Template SS confidence 
























































   271........280.........290.........300.........310.........320.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions