Job Description P77454 Confidence 97.78% Date Thu Jan 5 12:29:25 GMT 2012 Rank 9 Aligned Residues 176 % Identity 21% Template d1k25a4 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 3.20

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.																							.	.	.	60	.	.
Predicted Secondary structure																																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	Q	Q	A	V	D	Q	A	Y	T	Q	F	H	S	L	N	G	G	Q	N	A	D	Y	I	P	F	L	A	N	V	P	G	Q	L	A	A	V	A	I	V	T	C	D	.	G	N	V	Y	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	D	Y	R	F
Query Conservation																																														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	Q	S	F	M	E	T	Q	M	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	E	K	V	K	G	K	Y	M	T	A	T	L	V	S	A	K	T	G	E	I	L	A	T	T	Q	R	P	T	F	N	A	D	T	K	E	G	I	T	E	D	F	V	W	R	D	I	L	Y	Q	S	N	Y
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	T	T									S			B	T	T	T	T	B	T			T	T						T	T	T	S			B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.															280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	S	I	S	K	V	C	T	L	A	L	A	L	E	D	V	G	P	Q	A	V	Q	D	K	I	G	A	D	P	T	G	L	P	F	N	S	V	I	A	L	E	L	H	G	G	K	P	L	S	P	L	V	N	A	G	A	I	A	T	T	S	L	I	N	A	E	N	V	E	Q	R	W	Q	R	I	L	H	I
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template Sequence		E	P	G	S	A	M	K	V	M	T	L	A	S	S	I	D	N	.	.	.	.	.	.	.	.	.	.	N	T	F	P	S	G	E	Y	F	N	S	S	.	.	.	.	.	.	.	E	L	S	S	N	V	.	.	.	.	G	M	S	L	L	E	Q	K	M	G	.	.	.	.	.	.	.	D	A	T	W	L	D	Y
Template Known Secondary structure				T	T	T											T	T	.	.	.	.	.	.	.	.	.	.	T				S	S	S	G	G	G	G	G	.	.	.	.	.	.	.	G				S	S	.	.	.	.	S										.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.							.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350											.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.								.	380	.	.	.	.	.
		143	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure							.																																				.																																				.	.	.
Query SS confidence							.																																				.																																				.	.	.
Query Sequence		Q	Q	Q	L	A	.	G	E	Q	V	A	L	S	D	E	V	N	Q	S	E	Q	T	T	N	F	H	N	R	A	I	A	W	L	L	Y	S	A	G	Y	L	Y	.	C	D	A	M	E	A	C	D	V	Y	T	R	Q	C	S	T	L	L	N	T	I	E	L	A	T	L	G	A	T	L	A	A	G	G	V	.	.	.
Query Conservation							.																																				.																																				.	.	.
Alig confidence							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.														.																						.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		L	K	R	F	K	F	G	V	P	T	R	F	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	Y	A	G	Q	L	P	A	D	N	I	V	S	I	A	Q	S	S	F	G	Q	.	G	I	S	V	T	Q	T	Q	M	L	R	A	F	T	A	I	A	N	D	G	V	M	L	E
Template Known Secondary structure						T	T	T	S					S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					B				S	S							T	T	T	T	S	.	S		B	B														T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430																			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
																				218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	L	T	H	K	R	V	L	Q	A	D	N	V	P	Y	I	L	A	E	M	M	M	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	F	I	S	A	I	Y	D	T	N	N	Q	S	V	R	K	S	Q	K	E	I	V	G	N	P	V	S	K	E	A	A	S	T	T	R	N	H	M	I	L	V	G
Template Known Secondary structure			B				B			B	T	T	T	T	B			B										S													S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions