Job Description P77454 Confidence 96.82% Date Thu Jan 5 12:29:25 GMT 2012 Rank 23 Aligned Residues 240 % Identity 17% Template d1g6aa_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 1.75

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	L	Q	Q	A	V	D	Q	A	Y	T	Q	F	H	S	L	N	G	G	Q	N	A	D	Y	I	P	F	L	A	N	V	P	G	Q	L	A	A	V	A	I	V	T	C	D	G	N	V	Y	S	A	G	D	S	D	Y	R	F	A	L	E	S	I	S	K	V	C	T	L	A	L	A	L	E	D	V	G	P	Q	A
Query Conservation
Alig confidence																	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation																	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		Q	Q	V	E	Q	D	V	K	A	I	E	V	S	L	S	.	.	.	.	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	S	V	L	D	T	Q	N	G	E	Y	W	D	Y	N	G	N	Q	R	F	P	L	T	S	T	F	K	T	I	A	C	A	K	L	L	Y	D	.	.	.	.	.
Template Known Secondary structure															T	T	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T						S	T	T	S					G	G	G	G												.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	Q	D	K	I	G	A	D	P	T	G	L	P	F	N	S	V	I	A	L	E	L	H	G	G	K	P	L	S	P	L	V	N	A	.	.	.	G	A	I	A	T	T	S	L	I	N	A	E	N	V	E	Q	R	W	Q	R	I	L	H	I	Q	Q	Q	L	A	G	E	Q	V	A	L	S	D	E	V	N	Q	S	E
Query Conservation																																				.	.	.
Alig confidence		.	.	.	.	.	.																													.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	E	Q	G	K	V	N	P	N	S	T	V	E	I	K	K	A	D	L	V	T	Y	S	P	V	I	E	K	Q	V	G	Q	A	I	T	L	D	D	A	C	F	A	T	M	T	T	S	D	N	T	A	A	N	I	I	L	S	A	V	G	G	P	K	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.			T	T	S			T	T							G	G	G			S	S		T	T	G	G	G		T	T	S																											T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		Q	T	T	N	F	H	N	R	A	I	A	W	L	L	Y	S	A	G	Y	L	Y	C	.	.	.	.	D	A	M	E	A	C	D	V	Y	T	R	Q	C	S	T	L	L	N	T	I	E	L	A	T	L	G	A	T	L	A	A	G	G	V	N	P	L	T	H	K	R	V	L	Q	A	D	N	V	P	Y	I	L	A	E
Query Conservation																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.															.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	V	T	D	F	L	R	Q	I	G	D	K	E	T	R	L	D	R	I	E	P	D	L	N	E	G	K	L	G	D	L	R	D	T	T	T	P	K	A	I	A	S	T	L	N	K	F	L	F	G	.	.	.	.	.	.	.	.	S	A	L	S	E	M	N	Q	K	K	L	E	S	W
Template Known Secondary structure		.	.	.	.	.	.	.	.									T	T		S	S		B					T	T	G	G	G				T	T			T	T																	S	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Template SS confidence
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.	.	.	200	.	.	.	.	.	.	.	.	.	210
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.							.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																						.	.								.	.	.	.	.	.										.	.
Query SS confidence																						.	.								.	.	.	.	.	.										.	.
Query Sequence		M	M	M	E	G	L	Y	G	R	S	G	D	W	A	Y	R	V	G	L	P	.	.	G	K	S	G	V	G	G	.	.	.	.	.	.	G	I	L	A	V	V	P	G	V	.	.	M	G	I	A	A	F	S	P	P	L	D	E	D	G	N	S	V	R	G	Q	K	M	V	A	S	V	A	K	Q	L
Query Conservation																						.	.								.	.	.	.	.	.										.	.
Alig confidence																						.	.								.	.	.	.	.	.										.	.										.	.
Template Conservation																																																									.	.
Template Sequence		M	V	N	N	Q	V	T	G	N	L	L	R	S	V	L	P	A	G	W	N	I	A	D	K	S	G	A	G	G	F	G	A	R	S	I	T	A	V	V	W	S	E	H	Q	A	P	I	I	V	S	I	Y	L	A	Q	.	.	T	Q	A	S	M	E	E	R	N	D	A	I	V	K	I	G	H	S	I
Template Known Secondary structure				T		S	S		T	T	T	G	G	G	G			T	T											G	G	G											T	T												S	.	.
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions