Job Description P77454 Confidence 95.64% Date Thu Jan 5 12:29:25 GMT 2012 Rank 36 Aligned Residues 230 % Identity 19% Template d1dy6a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.1

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	N	K	L	Q	Q	A	V	D	Q	A	Y	T	Q	F	H	S	L	N	G	G	Q	N	A	D	Y	I	P	F	L	A	N	V	P	G	Q	L	A	A	V	A	I	V	T	C	D	G	N	V	Y	S	A	G	D	S	D	Y	R	F	A	L	E	S	I	S	K	V	C	T	L	A	L	A	L	E	D	V	G	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Sequence		K	S	D	A	A	A	K	Q	I	K	K	L	E	E	D	F	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	G	V	F	A	I	D	T	G	S	G	N	T	F	G	Y	R	S	D	E	R	F	P	L	C	S	S	F	K	G	F	L	A	A	A	V	L	E	R	V	.	.
Template Known Secondary structure																	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T							S	T	T	S					G	G	G	G													.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.														.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		Q	A	V	Q	D	K	I	G	A	D	P	T	G	L	P	F	N	S	V	I	A	L	E	L	H	G	G	K	P	L	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	N	A	G	A	I	A	T	T	S	L	I	N	A	E	N	V	E	Q	R	W	.	.	.	.	Q	R	I	L	H	I	Q	Q	Q
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Q	Q	K	K	L	D	I	N	Q	K	V	K	Y	E	S	R	D	L	E	Y	H	S	P	I	T	T	K	Y	K	G	S	G	M	T	L	G	D	M	A	S	A	A	L	Q	Y	S	D	N	G	A	T	N	I	I	M	E	R	F	L	G	G	P	E	G	M	T	K	F	M	R	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T	S	S		T	T						T	T					S								T	T	T	T														S													T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		146	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	A	.	.	G	E	Q	V	A	L	S	D	E	V	N	Q	S	E	Q	T	T	N	F	H	N	R	A	I	A	W	L	L	Y	S	A	G	Y	L	Y	C	D	A	M	E	A	C	D	V	Y	T	R	Q	C	S	T	L	L	N	T	I	E	L	A	T	L	G	A	T	L	A	A	G	G	V	N	P	L	T	H	K
Query Conservation				.	.
Alig confidence				.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		I	G	D	N	E	F	R	L	D	R	W	E	L	E	L	N	T	A	I	P	G	D	K	R	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	P	K	A	V	A	N	S	L	N	K	L	A	L	G	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S	S					S		T	T	G	G	G	G			T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																															.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.									.	.	.	.	270	.	.	.		.	.	.	.	.	.			280	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.									.	.	.	.	.	.	.	.									.							.	.
Query SS confidence																																				.	.	.	.	.	.									.	.	.	.	.	.	.	.									.							.	.
Query Sequence		R	V	L	Q	A	D	N	V	P	Y	I	L	A	E	M	M	M	E	G	L	Y	G	R	S	G	D	W	A	Y	R	V	G	L	P	.	.	.	.	.	.	G	K	S	G	V	G	G	G	.	.	.	.	.	.	.	.	I	L	A	V	V	P	G	V	.	M	G	I	A	A	F	.	.	S	P	P	L	D	E	D
Query Conservation																																				.	.	.	.	.	.									.	.	.	.	.	.	.	.									.							.	.
Alig confidence																				.	.	.	.													.	.	.	.	.	.									.	.	.	.	.	.	.	.									.							.	.
Template Conservation																				.	.	.	.
Template Sequence		N	V	L	N	A	K	V	K	A	I	Y	Q	N	W	L	K	G	N	.	.	.	.	T	T	G	D	A	R	I	R	A	S	V	P	A	D	W	V	V	G	D	K	T	G	S	C	G	A	Y	G	T	A	N	D	Y	A	V	I	W	P	K	N	R	A	P	L	I	V	S	I	Y	T	T	R	K	S	K	D	D	K
Template Known Secondary structure		S	S	S														T		.	.	.	.	S	S		T	T	T	G	G	G	G	S		T	T	S										S	S	T	T											T	T	S												S	S	T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	V	R	G	Q	K	M	V	A	S	V	A	K	Q	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	D	K	T	I	A	E	A	S	R	I	A	I	Q	A	I	D
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions