Job Description P77454 Confidence 97.77% Date Thu Jan 5 12:29:25 GMT 2012 Rank 11 Aligned Residues 268 % Identity 18% Template c3ue3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:septum formation, penicillin binding protein 3, PDBTitle: crystal structure of acinetobacter baumanni pbp3 Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																							.	.	60	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	Q	Q	A	V	D	Q	A	Y	T	Q	F	H	S	L	N	G	G	Q	N	A	D	Y	I	P	F	L	A	N	V	P	G	Q	L	A	A	V	A	I	V	T	C	D	G	N	V	Y	S	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Y	R	F	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	Q	Y	I	M	Y	R	E	L	T	A	A	G	V	A	N	N	A	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	I	A	V	D	V	K	T	G	E	I	L	A	M	T	S	W	P	S	Y	N	P	N	D	K	G	G	L	S	N	K	D	A	M	R	N	R	G	A	I	D	M	F	E
Template Known Secondary structure																		T	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T		B								S				T	T			S	S							S	S								B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.														.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		L	E	S	I	S	K	V	C	T	L	A	L	A	L	E	D	V	G	P	Q	A	V	Q	D	K	I	G	A	D	P	T	G	L	P	F	N	S	V	I	A	L	E	L	H	G	G	K	P	L	S	P	L	V	N	A	G	A	I	A	T	T	S	L	I	N	A	E	N	V	E	Q	R	W	.	.	Q	R	I	L	H
Query Conservation																																																																											.	.
Alig confidence																	.																							.				.	.																														.	.
Template Conservation																	.																							.				.	.
Template Sequence		P	G	S	T	M	K	P	F	T	V	A	A	A	L	E	.	S	G	Q	Y	T	P	N	S	I	V	N	T	A	P	G	T	M	R	L	G	W	H	.	T	I	R	.	.	D	T	H	N	Y	G	A	L	T	L	T	G	I	I	V	K	S	S	N	V	G	S	A	K	L	A	L	S	L	P	K	E	A	L	P	S
Template Known Secondary structure			G	G	G	G											.	T	T	S			T	T						T	T	S					T	T		.				.	.		S	S														T												S		T	T
Template Predicted Secondary structure																	.																							.				.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		142	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure								.																																																																						.	.	.	.
Query SS confidence								.																																																																						.	.	.	.
Query Sequence		I	Q	Q	Q	L	A	.	G	E	Q	V	A	L	S	D	E	V	N	Q	S	E	Q	T	T	N	F	H	N	R	A	I	A	W	L	L	Y	S	A	G	Y	L	Y	C	D	A	M	E	A	C	D	V	Y	T	R	Q	C	S	T	L	L	N	T	I	E	L	A	T	L	G	A	T	L	A	A	G	G	.	.	.	.
Query Conservation								.																																																																						.	.	.	.
Alig confidence								.								.	.	.														.	.	.	.	.	.	.	.	.	.	.																.																				.	.	.	.
Template Conservation																.	.	.														.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		F	F	R	R	A	G	F	G	Q	S	S	D	V	K	.	.	.	F	P	G	E	S	A	G	L	L	Y	S	A	D	.	.	.	.	.	.	.	.	.	.	.	K	L	N	S	S	Q	L	G	T	M	A	Y	G	Y	G	.	L	N	A	T	I	L	Q	L	A	Q	G	Y	A	M	L	A	N	H	G	V	E	M	P
Template Known Secondary structure						T	T	T	T	S			T	T		.	.	.		T	T					B				G	G	.	.	.	.	.	.	.	.	.	.	.	G										T	T	T		S	.	S	B	B													T	T	T	T
Template Predicted Secondary structure																.	.	.														.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.				.	.	.	.	.	.	430	.	.	.	.	.	.												.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
								217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.																	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.	.	.	.	.																																										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.																																										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	V	N	P	L	T	H	K	R	V	L	Q	A	D	N	V	P	Y	I	L	A	E	M	M	M	E	G	L	Y	G	R	S	G	D	W	A	Y	R	V	G	L	P	.	.	G	K	S	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	I	L	A	V	V	P	.
Query Conservation		.	.	.	.	.	.																																										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.																																										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		L	S	L	H	K	L	D	Q	V	P	E	G	R	Q	V	L	D	P	K	I	A	D	Q	V	L	M	M	L	E	Q	V	T	L	P	G	G	T	A	K	Q	A	V	I	P	G	Y	R	V	G	G	K	T	G	T	A	H	K	L	R	A	D	R	K	G	Y	S	N	S	E	Y	R	A	L	F	A	G	V	A	P	V
Template Known Secondary structure			B	S	B			S	S								S																T	S	T	T		S		G	G	G		B	T	T	B														T	T		S	S			S	S	S											T
Template Predicted Secondary structure
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
				272	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.	.										.	.
Query SS confidence		.	.										.	.
Query Sequence		.	.	G	V	M	G	I	A	A	F	S	.	.	P	P	L	D	E	D	G	N	S	V	R	G	Q	K	M	V	A	S	V	A	K	Q	L	G	Y
Query Conservation		.	.										.	.
Alig confidence		.	.										.	.
Template Conservation
Template Sequence		S	D	P	R	L	A	M	I	V	V	V	E	N	P	Q	G	R	Y	Y	G	G	L	V	A	A	P	V	F	A	K	I	M	Q	E	S	L	R	L
Template Known Secondary structure		T	S											S			S	S	S	S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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