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Job DescriptionP77454
Confidence93.47%DateThu Jan 5 12:29:25 GMT 2012
Rank50Aligned Residues226
% Identity15%Templatec3p09B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70........ .80.........90.........100..
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Query Sequence  QNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFALESISKVCTLALALE. . DVGPQAVQDKIGADPTGLPFNSVI
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Template Sequence  QLDDSFKNLENKYDGKIGIYTLNTDNIKY. . . NESYHFPICSVFKFLLVGAILDYDXHNQGFLDKKIPINQD. . . . . . . .
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GGGSTTGGG


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   20.........30.........40........ .50.........60.........70.........80........
 
   103......110. ........120.........130.........140....... ..150.........160.....
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Query Sequence  ALELHGGKP. . . . . . . . . . . . . . . LSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLA. . GEQVALSDEVNQSEQTTN
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Template Sequence  DIGKLGYAPITAKNVGKTLTISQLNYAAILSDSPASNILVRELGGLQNLN. . . KFIKKLGDNDTIITADEPEINYTQPHS
Template Known Secondary structure  TT



TTTGGGTTSTT
T
...TT

S
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TTGGG


TT
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   92.......100.........110.........120.........130.........140. ........150.........160........
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  FHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGLYG
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Template Sequence  NINK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TTPKAITKDIYKLAFG. . . . . . . . NILDKKHKDIFIKYLQDNNTGA
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TT..............................
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T
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   169170.. .......180........ .190.........200.........210
 
   246...250........ .260.... .....270 . ........280.........290.........300...
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Query Sequence  RSGDWAYRVGLPG. . KSGVGG. . . . . GILAVV. . P. . GVMGIAAFSPPLDEDGNSVRGQKMVASVAKQL
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Template Sequence  NRIAFSXPKDWIIGDKTGTCGQYAATNDVAIIWPKNQQPIALGILYTN. PNDKNAPSNEEIIQQAAKLI
Template Known Secondary structure  TTGGGGS
TTS
SSTT

TTS


.TT
TT



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   211........220.........230.........240.........250........ .260.........270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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