Return to main results Retrieve Phyre Job Id

Job DescriptionP77454
Confidence86.58%DateThu Jan 5 12:29:25 GMT 2012
Rank70Aligned Residues42
% Identity12%Templatec2jciA_
PDB info PDB header:drug-binding proteinChain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: structural insights into the catalytic mechanism and the2 role of streptococcus pneumoniae pbp1b
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210...... ... 220.........230........
Predicted Secondary structure 



..


..................





Query SS confidence 



















. .


. . . . . . . . . . . . . . . . . .


















Query Sequence  STLLNTIELATLGATLAAGG. . VNP. . . . . . . . . . . . . . . . . . LTHKRVLQADNVPYILAEM
Query Conservation 

 

  


  





 
..
 
.................. 


 

     
 


 
Alig confidence 



















..


..................


















Template Conservation     






 



 

 
    
  
  
 
  
 

        

 
  

  
  

Template Sequence  GIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLL
Template Known Secondary structure  T

B
TTT


BS
TTS






S
Template Predicted Secondary structure 























Template SS confidence 





























































   559560.........570.........580.........590.........600.........610.........620
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions