Return to main results Retrieve Phyre Job Id

Job DescriptionP77454
Confidence88.00%DateThu Jan 5 12:29:25 GMT 2012
Rank64Aligned Residues42
% Identity14%Templatec2bg1A_
PDB info PDB header:peptidoglycanChain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: active site restructuring regulates ligand recognition in2 classa penicillin-binding proteins (pbps)
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210...... ...220.........230........
Predicted Secondary structure 



....................








Query SS confidence 



















. . . . . . . . . . . . . . . . . . . .





















Query Sequence  STLLNTIELATLGATLAAGG. . . . . . . . . . . . . . . . . . . . VNPLTHKRVLQADNVPYILAEM
Query Conservation 

 

  


  





 
....................
 
 


 

     
 


 
Alig confidence 



















....................





















Template Conservation     






 








    
  
  
 
  
 

        

 
  

  
   
Template Sequence  GIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLL
Template Known Secondary structure  T

B
TTT


BS
TTS






S
Template Predicted Secondary structure 






















Template SS confidence 





























































   559560.........570.........580.........590.........600.........610.........620
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions