Job Description P05804 Confidence 100.00% Date Thu Jan 5 10:58:55 GMT 2012 Rank 17 Aligned Residues 271 % Identity 17% Template d2vzsa5 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Q	F	L	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		G	R	Q	Y	S	V	N	G	K	P	L	L	I	R	G	G	G	Y	T	P	D	L	F	L	.	.	.	R	W	N	E	T	A	A	A	D	K	L	K	Y	V	L	N	L	G	L	N	T	V	R	L	E	G	H	I	E	P	D	E	F	F	D	I	A	D	D	L	G	V	L	T	M	P	G	W	E	C	C	D	K
Template Known Secondary structure								T	T														T	T		.	.	.																	T	T								S															T									S	S	S	G
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		W	E	G	Q	V	N	G	.	.	.	.	.	.	.	.	.	E	E	K	G	E	P	W	V	E	S	D	Y	P	I	A	K	A	S	M	F	S	E	A	E	R	L	R	D	H	P	S	V	I	S	F	H	I	G	S	D	F	A	P	D	.	.	.	.	R	R	I	E	Q	G	Y	L	D	A	M	K	A	A	D	F
Template Known Secondary structure		G	G	T	T	T	S	T	.	.	.	.	.	.	.	.	.	T	S	S	S					T	T																	T	T		T	T	B					S		S	S	S				.	.	.	.														T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
		423	.	.	.	.	.	.										430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.					.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	P	V	I	P	A	A	S	A	R	P	S	P	I	T	G	A	S	G	.	M	K	M	N	G	P	Y	D	Y	V	P	P	V	Y	W	Y	D	K	S	Q	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	G	A	W	S	F	N	S	E	T	S	A	G	V	D	I	P	T	M	D	T	L
Template Known Secondary structure			S				S		S	S	S				S	S	S					.								S				G	G	G	G	G			S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S	S									S	B
Template Predicted Secondary structure																						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.															.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
																					512	.	.	.	.	.	.	.	520	.																											.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540						.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	H	S	M	Y	T	D	M	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	.	.	.	.	.	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		K	R	M	M	S	A	S	E	L	D	T	M	W	K	N	P	S	A	K	Q	Y	H	R	S	S	S	D	T	F	G	N	L	K	L	F	G	D	A	L	T	K	R	Y	G	A	S	A	N	L	N	D	F	V	R	K	A	Q	L	S	Q	Y	E	N	V	R	A	E	F	E	S	H	S	R	N	Y	T	D	S	T	N
Template Known Secondary structure					S												T	T	S	B		T	T	S		S	S	S	T	T	S	B																S	S																											T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		P	S	T	G	L	I	Y	W	M	L	N	S	P	W	T	S	L	H	W	Q	.	.	.	.	.	.	.	.	L	F	D	A	Y	M	D	Q	N	G	A	Y	Y	G	A	K	K	A
Template Known Secondary structure									S		S	S		S	S	S		S	B	S		.	.	.	.	.	.	.	.	S	B		T	T			B
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.									.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions