Job Description P05804 Confidence 99.68% Date Thu Jan 5 10:58:55 GMT 2012 Rank 82 Aligned Residues 234 % Identity 16% Template d2pb1a1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		E	Q	D	F	K	Q	I	S	N	L	G	L	N	F	V	R	I	P	I	G	Y	W	A	F	Q	L	L	D	N	D	P	Y	V	Q	G	Q	V	Q	Y	L	E	K	A	L	G	W	A	R	K	N	N	I	R	V	W	I	D	L	H	G	A	P	G	.	.	.	.	.	.	S	Q	N	G	F	D	N	S	G	L	R
Template Known Secondary structure											T	T										G	G	G	T				T	T																					T	T											T	T	.	.	.	.	.	.		S	S			G	G	G	S	S	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																															.	.	.																.	.	.																											.	.	.	.
Query SS confidence																															.	.	.																.	.	.																											.	.	.	.
Query Sequence		Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	.	.	.	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	.	.	.	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	.	.	.	.
Query Conservation																															.	.	.																.	.	.																											.	.	.	.
Alig confidence																															.	.	.																.	.	.																											.	.	.	.
Template Conservation
Template Sequence		D	S	Y	N	F	Q	N	G	D	N	T	Q	V	T	L	N	V	L	N	T	I	F	K	K	Y	G	G	N	E	Y	S	D	V	V	I	G	I	E	L	L	N	E	P	L	G	P	V	L	N	M	D	K	L	K	Q	F	F	L	D	G	Y	N	S	L	R	Q	T	G	S	V	T	P	V	I	I	H	D	A	F	Q
Template Known Secondary structure		T				T	T	S	T	T																	S	S	G	G	G	T	T	T						S		S				G	G	G	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
			445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure		.																																												.	.																											.	.	.	.	.	.	.	.
Query SS confidence		.																																												.	.																											.	.	.	.	.	.	.	.
Query Sequence		.	N	V	M	F	C	D	A	H	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	.	.	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	.	.	.	.	.	.	.	.
Query Conservation		.																																												.	.																											.	.	.	.	.	.	.	.
Alig confidence		.																										.																		.	.																											.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		V	F	G	Y	W	N	N	F	L	T	V	A	E	G	Q	W	N	V	V	V	D	H	H	H	Y	Q	.	V	F	S	G	G	E	L	S	R	N	I	N	D	H	I	S	V	A	C	N	W	G	W	D	A	K	K	E	S	H	W	N	V	A	G	E	W	S	A	A	L	T	D	C	A	K	W	L	N	G	V	N	R
Template Known Secondary structure			T	T	T	T	T	T	S	S		G	G	G	T			S									S	.		S	S					T																			T		S	S									S		S	S			S	T	T	T	T		T	T
Template Predicted Secondary structure																												.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
																				514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	R	Y	E	G	A	Y	D	N	A	P	Y	I	G	S	C	Q	P	L	L	D	I	S	Q	W	S	D	E	H	K	T	D	T	R	R	Y	I	E	A	Q	L	D	A	F	E	Y	T	G	G	W	V	F	W	S	W	K
Template Known Secondary structure				T	T	B	T		S	T	T			B				S	G	G	G	S	S	G	G	G																						T	T	T					S		S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions