Job Description P05804 Confidence 96.60% Date Thu Jan 5 10:58:55 GMT 2012 Rank 164 Aligned Residues 270 % Identity 14% Template d2nt0a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.79

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		305	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330															.	.	.	.	.	.																	.	.	.	340	.	.	.	.	.				.	.	.
Predicted Secondary structure																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		G	F	D	N	V	L	M	V	H	D	H	A	L	M	.	.	.	D	W	I	G	A	N	S	Y	R	T	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	Y	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	W	A	D	E	H	G	.	.	.	I	V	V
Query Conservation																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		A	L	S	P	P	A	Q	N	L	L	L	K	S	Y	F	S	E	E	G	I	G	Y	N	I	I	R	V	P	M	A	S	C	D	F	S	I	R	T	Y	T	Y	A	D	T	P	D	D	F	Q	L	H	N	F	S	L	P	E	E	D	T	K	L	K	I	P	L	I	H	R	A	L	Q	L	A	Q	R	P	V	S	L
Template Known Secondary structure		T	S														S	T	T	T	T										S			S	S	S	S	S				S			S	T	T		T	T		T	T									T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		349	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																																																				.																	.	.	.	.	.	.	.
Query SS confidence					.	.																																																				.																	.	.	.	.	.	.	.
Query Sequence		I	D	E	.	.	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	.	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	.	.	.	.	.	.	.
Query Conservation					.	.																																																				.																	.	.	.	.	.	.	.
Alig confidence					.	.																					.	.	.	.	.	.	.																									.																	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.
Template Sequence		L	A	S	P	W	T	S	P	T	W	L	K	T	N	G	A	V	N	G	K	G	S	L	K	G	.	.	.	.	.	.	.	Q	P	G	D	I	Y	H	Q	T	W	A	R	Y	F	V	K	F	L	D	A	Y	A	E	H	K	L	Q	F	W	A	V	T	A	E	N	E	P	S	A	G	L	L	S	G	Y	P	F	Q
Template Known Secondary structure						S				G	G	G	B	T	T		S	S	S	S	S		B	B	S	S	.	.	.	.	.	.	.		T	T	S																				T	T				S				S		S	S	G	G	G	G	G	S	T	T			S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
								419	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.								.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.	.										.								.	.																			.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.										.								.	.																			.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Q	G	A	R	E	Y	F	A	P	.	L	A	E	A	T	R	K	.	.	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	.	.	.	.	.	.	.	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E
Query Conservation		.	.	.	.	.	.										.								.	.																			.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.										.								.	.																			.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.
Template Sequence		C	L	G	F	T	P	E	H	Q	R	D	F	I	A	R	D	L	G	P	T	L	A	N	S	T	H	H	N	V	R	L	L	M	L	D	D	Q	R	L	L	L	P	H	W	A	K	V	V	L	T	D	P	E	A	A	K	Y	V	H	G	I	A	V	H	W	Y	L	D	F	L	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure				B													T							T	S	T	T	T	T	S									G	G	G	T	T								T	S					T	T										T	T	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.										.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.		.	.	.	.	.	.	.	560	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	.	D	F	A	T	S	Q	G	I	L
Query Conservation																																																																								.
Alig confidence																																										.	.	.																.												.
Template Conservation																																										.	.	.																.
Template Sequence		P	A	K	A	T	L	G	E	T	H	R	L	F	P	N	T	M	L	F	A	S	E	A	C	V	G	S	K	F	W	E	Q	S	V	R	L	G	S	W	D	.	.	.	R	G	M	Q	Y	S	H	S	I	I	T	N	L	L	Y	.	H	V	V	G	W	T	D	W	N	L	A	L	N	P	E	G	G	P	N	W	V
Template Known Secondary structure															T	T	S												S	T	T	S		S			T	T				.	.	.															T	.	T									S				T	T	S				S	S
Template Predicted Secondary structure																																										.	.	.																.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		R	V	G	G	N	K	K	G	I	F	T	R	D	R	.	.	.	K	P	K	S	A	A	F	L	L	Q	K	R	W	T	G	M	N	F	G
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		R	N	F	V	D	S	P	I	I	V	D	I	T	K	D	T	F	Y	K	Q	P	M	F	Y	H	L	G	H	F	S	K	F	I	P	E	G
Template Known Secondary structure								S					G	G	G	T																T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions