Job Description P05804 Confidence 86.93% Date Thu Jan 5 10:58:55 GMT 2012 Rank 189 Aligned Residues 94 % Identity 15% Template d2guya2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.59

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		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																		.	330	.	.	.	.																.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	Q	G	I	I	D	K	L	D	Y	I	Q	G	M	G	F	T	A	I	W	I	T	P	V	T	A	Q	L	P	Q	T	T	A	Y	G	D	A	Y	H	G	Y	W	Q	Q	D	I	Y	S	L	N	E	N	Y	G	T	A	D	D	L	K	A	L	S	S	A	L	H	E	R	G	M	Y	L	M	V	D	V	V	A
Template Known Secondary structure									T						T	T	T																	B	T	T	B			T	T	S		S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																																		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	H	M	G	Y	D	G	A	G	S	S	V	D	Y	S	V	F	K	P	F	S	S	Q	D	Y	F	H	P	F	C	F	I	Q	N	Y	E	D	Q	T	Q	V	E	D	C	W	L	G	D	N	T	V	S	L	P	D	L	D	T	T	K	D	V	V	K	N	E	W	Y	D	W	V	G	S	L	V	S	N	Y	S
Template Known Secondary structure		S	B					B		G	G	G			G	G	G	S	B	S			S	G	G	G	B			S		B				T	T								S	B				S	S					B	B		T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions