Job Description P05804 Confidence 99.35% Date Thu Jan 5 10:58:55 GMT 2012 Rank 123 Aligned Residues 250 % Identity 13% Template d2cyga1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P
Query Conservation
Alig confidence													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	C	Y	G	M	L	G	N	N	L	.	.	.	P	P	P	S	E	V	.	.	.	V	S	L	Y	K	S	N	N	I	A	R	M	R	L	.	.	Y	D	P	N	Q	A	A	L	Q	A	L	R	N	S	N	I	Q	V	L	L	D	V	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S		.	.	.							.	.	.							T	T							.	.	S	S										T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.							.	.	.															.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.						.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	.	.	.	.	.	D	P	T	R	P	I	T	C	V	N	V
Query Conservation																																																																		.	.	.	.	.
Alig confidence		.	.	.	.																																																													.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	D	V	Q	S	L	A	S	N	P	S	A	A	G	D	W	I	R	R	N	V	V	A	Y	W	P	S	V	S	F	R	Y	I	A	V	G	N	E	L	I	P	G	S	D	L	A	Q	Y	I	L	P	A	M	R	N	I	Y	N	A	L	S	S	A	G	L	Q	N	Q	I	K	V	S	T	A	V	D
Template Known Secondary structure		.	.	.	.										T	T										T	G	G	G	T	T	T	S										S		T	T	T	S	T	T	G	G	G															T	T		T	T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		447	.	.	450	.	.	.	.	.																					.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.																									.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	C	D	A	H	T	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	S	G	D	L	E	T	A	E
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	V	L	G	T	S	Y	P	P	S	A	G	A	F	S	S	A	A	Q	A	Y	L	S	P	I	V	Q	F	L	A	S	N	G	A	P	L	L	V	N	V	Y	P	Y	F	S	Y	T	G	N	P	G	Q	I	S	L	P	Y	A	L	F	T	A	S	G	V	V	V	Q	D	G	R	F	S	Y	Q	N	L	F	D
Template Known Secondary structure		G	G	G	B	S			S	S	G	G	G			B																			T																S	T	T	T	S							T				S		S				T	T					S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		483	.	.	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.						.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure														.	.																																												.	.	.	.	.
Query SS confidence														.	.																																												.	.	.	.	.
Query Sequence		K	V	L	E	K	E	L	L	A	W	Q	E	.	.	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	.	.	.	.	.	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A
Query Conservation														.	.																																												.	.	.	.	.
Alig confidence														.	.																		.	.	.	.	.																						.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		A	I	V	D	A	V	F	A	A	L	E	R	V	G	G	A	N	V	A	V	V	V	S	E	S	G	W	P	S	A	G	.	.	.	.	.	G	G	A	E	A	S	T	S	N	A	Q	T	Y	N	Q	N	L	I	R	H	V	G	G	G	T	P	R	R	P	G	K	E	I	E	A	Y	I	F	E	M	F	N	E	N
Template Known Secondary structure													T	T	T		T	T												S	S	S	.	.	.	.	.	S	S	T	T	S	S															G	G	G			S	S	S		S	S							S		S	B			T
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		Q	K	.	.	.	A	G	G	I	E	Q	N	F	G	L	F	Y	P	N	K	Q	P	V
Template Known Secondary structure		T	S	.	.	.		S	S	G	G	G				S	B		T	T	S		B	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		316	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions