Job Description P05804 Confidence 99.98% Date Thu Jan 5 10:58:55 GMT 2012 Rank 26 Aligned Residues 268 % Identity 18% Template d2c0ha1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.6

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	K	G	E	Q	F	L	I	N	H	K	P	F	Y	F	T	G	F	G	R	H	.	.	.	.	.	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	V	S	G	T	N	L	N	Y	N	G	H	H	I	F	L	S	G	A	N	Q	A	W	V	N	Y	A	R	D	F	G	H	N	Q	Y	S	K	G	K	S	T	F	E	S	T	L	S	D	M	Q	S	H	G	G	N	S	V	R	V	W	L	H	I	E	G	E	S	T	P	E	F	D	N	N	G	Y	V	T	G
Template Known Secondary structure						T	T					T	T													S	S	T	T		S	S	S	T	T																			T	T											T	T	S	S	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
											335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		I	D	N	T	L	I	S	D	M	R	A	Y	L	H	A	A	Q	R	H	N	I	L	I	F	F	T	L	W	N	G	A	V	.	.	.	.	.	.	.	.	.	K	Q	S	T	H	Y	R	L	N	G	L	M	V	D	T	R	K	L	Q	S	Y	I	D	H	A	L	K	P	M	A	N	A	L	K	N	E	K	A	L
Template Known Secondary structure				T	T															T	T											S		.	.	.	.	.	.	.	.	.			T	T																					T									T	T		T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420																															.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	W	S	I	A	N	E	P	D	T	R	P	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	T	D	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	W	D	I	M	N	E	P	E	G	E	I	K	P	G	E	S	S	S	E	P	C	F	D	T	R	H	L	S	G	S	G	A	G	W	A	G	H	L	Y	S	A	Q	E	I	G	R	F	V	N	W	Q	A	A	A	I	K	E	V	D	P	G	A	M	V	T	V	G	S	W	N	M	K	A	D	T	D	A	M
Template Known Secondary structure										G	G	G	G	B			S				S	S	G	G	G			G	G	G	T	T	S		T	T	T	T		S		B																					T	T								S		G	G	G	B		S	S	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		456	.	.	.	460																		.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L	E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	V	D	T	L	A	G	L	H	S	M	Y	T
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		G	F	H	N	L	Y	S	D	H	C	L	V	K	A	G	G	K	Q	S	G	T	L	S	F	Y	Q	V	H	T	Y	D	W	Q	N	H	F	G	N	E	S	P	F	K	H	S	F	S	N	F	.	.	.	.	.	.	.	R	L	K	K	P	M	V	I	G	E	F	N	Q	E	H	G	A	G	M	S	.	.	.	.
Template Known Secondary structure		T			B	T	T	S											T	T				S	S								B	T	T	B			T	T		T	T	S	S		G	G	G	G	.	.	.	.	.	.	.			S	S									G	G	G	S	T	T			.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.								.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.					.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	A	V	V	G	E	Q	V	W	N	F	A	D	F	A	T	S	Q	G	I	L	R	.	.	.	.	V	G	G	N	K	K	G	I	F	T	R
Query Conservation																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.														.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	E	S	M	F	E	W	A	Y	T	K	G	Y	.	S	G	A	W	T	W	S	R	T	D	V	S	W	N	N	Q	L	R	G	M	Q	H	L	K	S	R	T	D	H	G	Q	V	Q	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T		.	S					S		S	S	S	S												T	T	T			T	T	S	B	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
													319	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions