Return to main results Retrieve Phyre Job Id

Job DescriptionP05804
Confidence65.70%DateThu Jan 5 10:58:55 GMT 2012
Rank251Aligned Residues128
% Identity15%Templated1wzla3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320........ .330.... .....340.........350.....
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Query Sequence  DNVLMVHDHALMDWIGANSYRT. . . . . . . . . SHYPYA. . . . . . . . . . . . . . . EEMLDWADEHGIVVIDETAAV. . . . . . .
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Template Sequence  DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFF
Template Known Secondary structure 
TT





SSSS

S
S
TTT

TTT


SB

TTS
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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   356...360.........370.........380.........390.........400.........410.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . GFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIA
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Template Sequence  AFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM. E. QGIDGWRL. . . .
Template Known Secondary structure  GGG
TTGGGB
BSSSS


SS

SB
BSSSS
TT
BBB
TTS..TT

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   251........260.........270.........280.........290.........300.........310..... . ...320....
 
   412.......420.........430.........440...
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Query Sequence  NEPDTRPQGAREYFAPLAEATRKLDPTRPITC
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Template Sequence  . . . DVANEVDHAFWREFRRLVKSLNPDALIVG
Template Known Secondary structure  ...TTGGGS

TT
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   325....330.........340.........350...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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