Job Description P05804 Confidence 97.93% Date Thu Jan 5 10:58:55 GMT 2012 Rank 156 Aligned Residues 152 % Identity 12% Template d1vema2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.85

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.															.	.	.	.	.	340	.	.
Predicted Secondary structure																.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	Q	F	L	I	N	H	K	P	F	Y	F	T	.	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	S	H	Y	P	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	D	W	A	D
Query Conservation																.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		N	G	K	G	M	N	P	D	Y	K	A	Y	L	M	A	P	L	K	K	I	P	E	.	.	.	.	.	.	V	T	N	W	E	T	F	E	N	D	L	R	W	A	K	Q	N	G	F	Y	A	I	T	V	D	F	W	W	G	D	M	E	K	N	G	D	Q	Q	F	D	F	S	Y	A	Q	R	F	A	Q	S	V	K
Template Known Secondary structure		G	G					T	T									S	S		G	G	G	.	.	.	.	.	.	T	S															T	T														T		S	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.																		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380											.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	G	I	V	V	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	.	.	.	.	.	.	.	.	.	.	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	G	M	K	M	I	P	I	I	S	T	H	Q	C	G	G	N	V	G	D	D	C	N	V	P	I	P	S	W	V	W	N	Q	K	S	D	D	S	L	Y	F	K	S	E	T	G	T	V	N	K	E	T	L	N	P	L	A	S	D	V	I	R	K	E	Y	G	E	L	Y	T	A	F	A	A	A	M	K	P	Y
Template Known Secondary structure			T	T										S		B	S	S	S	T	T					B				G	G	G	G	G	G		S	S	S		S	S				T	T						S	S			T	T																				T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		396	.																.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.							.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	.	.	.	.	.	.	P	Q	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	V	I	A	K	I	Y	L	S	G	G	P	A	G	E	L	R	Y	P	S	Y	T	T	S	D	G	T	G	Y	P	S	R	G	K	F	Q	A	Y	T	E	F	A	K	S	K	F	R	L	W	V	L	N	K	Y	G	S	L	N	E	V
Template Known Secondary structure		G	G	G	B								S	G	G	G	B	S	S						T	T	T	T			T	T	S								S																S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions