Job Description P05804 Confidence 99.77% Date Thu Jan 5 10:58:55 GMT 2012 Rank 65 Aligned Residues 288 % Identity 14% Template d1us3a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.85

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	T	G	F	G	R	H	E	D	A	D	L	R	G	K	G	F	D	N	V	L	M	V	H	D	H	A	L	M	D	W	I	G	A	N	S	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	Y	A	E	E	M	L	D	W	A	D	E	H	G	I	V	V	I	D	E	T	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		F	P	I	G	V	A	V	S	N	T	D	S	A	T	Y	N	L	L	T	N	S	R	E	Q	A	V	V	K	K	H	.	.	.	.	F	N	H	L	T	A	G	N	I	M	K	M	S	Y	M	Q	P	T	E	G	N	F	N	F	T	N	A	D	A	F	V	D	W	A	T	E	N	N	M	T	V	H	G	H	A	L
Template Known Secondary structure									B		T	T		T	T	T	B	T	T	T												.	.	.	.		S					S	S	T	T	S						S	B	T	T	B																T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	G	F	N	L	S	L	G	I	G	F	E	A	G	N	K	P	K	E	L	Y	S	E	E	A	V	N	G	E	T	Q	Q	A	H	L	Q	A	I	K	E	L	I	A	R	D	K	N	H	P	S	V	V	M	W	S	I	A	N	E	P	D	T	R	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		V	W	H	S	.	.	.	.	.	.	.	.	.	D	Y	Q	V	P	N	F	M	K	N	W	A	G	S	A	E	D	F	L	A	A	L	D	T	H	I	T	T	I	V	D	H	Y	E	A	K	G	N	L	V	S	W	D	V	V	N	E	A	I	D	D	N	S	P	A	N	F	R	T	T	D	S	A	F	Y	V	K
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	G	G	G	S						T			S																																				B		S	S	S	S			B			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		335	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
				420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.													.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	A	R	E	Y	F	A	P	L	A	E	A	T	R	K	L	D	P	T	R	P	I	T	C	V	N	V	M	F	C	D	A	H	.	.	.	.	.	.	.	.	.	.	.	.	T	D	T	I	S	D	L	F	D	V	L	C	L	N	R	Y	Y	G	W	Y	V	Q	S	G	D	L	E	T	A	E	K	V	L
Query Conservation		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																																	.	.
Template Sequence		S	G	N	S	S	V	Y	I	E	R	A	F	Q	T	A	R	A	A	D	P	A	V	I	L	Y	Y	N	D	Y	N	I	E	Q	N	N	A	K	T	T	K	M	V	D	M	V	K	D	F	Q	A	R	S	I	P	I	D	G	V	G	F	Q	M	H	.	.	V	C	M	N	Y	P	S	I	A	N	I	S	A	A	M
Template Known Secondary structure		T	T	S		S															T	T	S							S	S	T	T	S		S																T	T												.	.			S	S		S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.			.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.								.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.				.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																							.	.	.	.	.	.	.																																				.	.	.
Query Sequence		E	K	E	L	L	A	W	Q	E	K	L	H	Q	P	I	I	I	T	E	Y	G	.	.	.	.	.	.	.	V	D	T	L	A	G	L	H	S	M	Y	T	D	M	W	S	E	E	Y	Q	C	A	W	L	D	M	Y	H	R	V	F	D	R	V	S	.	.	.	A	V	V	G	E	Q	V	W	N	F	A	D	F	A
Query Conservation																							.	.	.	.	.	.	.																																				.	.	.
Alig confidence						.	.	.	.	.													.	.	.	.	.	.	.																																				.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		K	K	V	V	.	.	.	.	.	D	L	G	L	L	V	K	I	T	E	L	D	V	A	V	N	Q	P	H	C	D	A	Y	P	A	N	K	I	N	P	L	T	E	A	A	Q	L	A	Q	K	K	R	Y	C	D	V	V	K	A	Y	L	D	T	V	P	V	N	Q	R	G	G	I	S	V	W	G	T	T	D	A	N
Template Known Secondary structure						.	.	.	.	.	T	T	T												S	S		T	T	S	T	T	T	T	T	T				S																								S		G	G	G							S		S	B	G	G	G
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		484	.	.	.						.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		556							.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	S	Q	G	I	L	R	V	G	G	N	K	K	G	I	F	T	R	D	R	K	P	K	S	A	A	F	L	L	Q	K	R	W	T	G	M	N	F	G	E	K
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	L	D	G	L	Y	R	E	Q	F	E	D	E	K	I	S	W	P	L	L	F	D	N	N	Y	N	D	K	P	A	L	R	G	F	A	D	A	L	I	G	T	Q	C	T	N	T
Template Known Secondary structure								T	T	T	T	T	T	T							S	S	B		T	T	S		B													T					S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions